This methodological workshop will take place on Tuesday, May 15 from 10:00 to 12:30 and from 14:00 to 17:00 and will be led by Philippe Lopez.
It will take place on the Jussieu campus in room RC03 of the Atrium.
The following topics will be covered :
- Construction of biological networks from different types of data (similarity, protein-protein interactions, …);
- Visualization of networks with Gephi and Cytoscape software: comparison of different types of visualization, creation of attribute files to characterize network nodes, coloring of the network according to various attributes, biological interpretation of topologies examples from real data;
- Manipulation of networks and calculations of various topological indices allowing to describe them.
This workshop will be on a machine, a (minimal) knowledge of the Python programming language is desired but is not essential.
Registration by email at BioSys.SU@gmail.com.